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[ CAS No. 1403254-99-8 ] {[proInfo.proName]}

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Chemical Structure| 1403254-99-8
Chemical Structure| 1403254-99-8
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Quality Control of [ 1403254-99-8 ]

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Product Details of [ 1403254-99-8 ]

CAS No. :1403254-99-8 MDL No. :MFCD24849415
Formula : C34H44N4O4 Boiling Point : -
Linear Structure Formula :- InChI Key :NSQSAUGJQHDYNO-UHFFFAOYSA-N
M.W : 572.74 Pubchem ID :66558664
Synonyms :
EPZ-6438
Chemical Name :N-((4,6-Dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-5-(ethyl(tetrahydro-2H-pyran-4-yl)amino)-4-methyl-4'-(morpholinomethyl)-[1,1'-biphenyl]-3-carboxamide

Calculated chemistry of [ 1403254-99-8 ]      Expand+

Physicochemical Properties

Num. heavy atoms : 42
Num. arom. heavy atoms : 18
Fraction Csp3 : 0.47
Num. rotatable bonds : 10
Num. H-bond acceptors : 5.0
Num. H-bond donors : 2.0
Molar Refractivity : 172.07
TPSA : 86.9 ?2

Pharmacokinetics

GI absorption : High
BBB permeant : No
P-gp substrate : Yes
CYP1A2 inhibitor : No
CYP2C19 inhibitor : Yes
CYP2C9 inhibitor : No
CYP2D6 inhibitor : Yes
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -6.83 cm/s

Lipophilicity

Log Po/w (iLOGP) : 4.37
Log Po/w (XLOGP3) : 4.18
Log Po/w (WLOGP) : 4.05
Log Po/w (MLOGP) : 2.69
Log Po/w (SILICOS-IT) : 6.64
Consensus Log Po/w : 4.39

Druglikeness

Lipinski : 1.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 0.0
Bioavailability Score : 0.55

Water Solubility

Log S (ESOL) : -5.68
Solubility : 0.00119 mg/ml ; 0.00000208 mol/l
Class : Moderately soluble
Log S (Ali) : -5.71
Solubility : 0.00111 mg/ml ; 0.00000193 mol/l
Class : Moderately soluble
Log S (SILICOS-IT) : -9.88
Solubility : 0.0000000748 mg/ml ; 0.0000000001 mol/l
Class : Poorly soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 3.0
Synthetic accessibility : 4.43

Safety of [ 1403254-99-8 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H302-H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 1403254-99-8 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 1403254-99-8 ]
  • Downstream synthetic route of [ 1403254-99-8 ]

[ 1403254-99-8 ] Synthesis Path-Upstream   1~13

  • 1
  • [ 1403257-80-6 ]
  • [ 364794-79-6 ]
  • [ 1403254-99-8 ]
YieldReaction ConditionsOperation in experiment
71% With sodium carbonate In 1,4-dioxane; water; acetonitrile at 100℃; for 4 h; Inert atmosphere Step 7:
Synthesis of N-((4,6-dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-5-(ethyl(tetrahydro-2H-pyran-4-yl)amino)-4-methyl-4'-(morpholinomethyl)-[1,1'-biphenyl]-3-carboxamide
To a stirred solution of 5-bromo-N-((4,6-dimethyl-2-oxo-1,2-dihydropyridin-3-yl)methyl)-3-(ethyl(tetrahydro-2H-pyran-4-yl)amino)-2-methylbenzamide (14 g, 29.5 mmol) in dioxane/water mixture (70 mL/14 mL) was added 4-(4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)benzyl)morpholine (13.4 g, 44.2 mmol) followed by addition of Na2CO3 (11.2 g, 106.1 mmol).
The solution was purged with argon for 15 minutes and then Pd (PPh3)4 (3.40 g, 2.94 mmol) was added and the solution was again purged with argon for a further 10 min.
The reaction mixture was heated at 100° C. for 4 h.
After completion (monitored by TLC), the reaction mixture was diluted with water and extracted with 10percent MeOH/DCM.
The combined organic layers were dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure.
The crude compound was purified by column chromatography (100-200 mesh silica gel) eluting with methanol: DCM to the title compound as a solid (12 g, 71percent).
Analytical Data: LCMS: 573.35 (M+1)+; HPLC: 99.5percent ( 254 nm) (Rt; 3.999; Method: Column: YMC ODS-A 150 mm*4.6 mm*5μ; Mobile Phase: A; 0.05percent TFA in water/B; 0.05percent TFA in acetonitrile; Inj. Vol: 10 μL, Col. Temp.: 30° C.; Flow rate: 1.4 mL/min.;
Gradient: 5percent B to 95percent B in 8 min, Hold for 1.5 min, 9.51-12 min 5percent B); 1H NMR (DMSO-d6, 400 MHz) δ 11.46 (s, 1H), 8.19 (t, 1H), 7.57 (d, 2H, J=7.2 Hz), 7.36-7.39 (m, 3H), 7.21 (s, 1H), 5.85 (s, 1H), 4.28 (d, 2H, J=2.8 Hz), 3.82 (d, 2H, J=9.6 Hz), 3.57 (bs, 4H), 3.48 (s, 2H), 3.24 (t, 2H, J=10.8 Hz), 3.07-3.09 (m, 2H), 3.01 (m, 1H), 2.36 (m, 4H), 2.24 (s, 3H), 2.20 (s, 3H), 2.10 (s, 3H), 1.64-1.67 (m, 2H), 1.51-1.53 (m, 2H), 0.83 (t, 3H, J=6.4 Hz).
71%
Stage #1: With sodium carbonate In 1,4-dioxane; water for 0.25 h; Inert atmosphere
Stage #2: With tetrakis(triphenylphosphine) palladium(0) In 1,4-dioxane at 100℃; for 4.2 h; Inert atmosphere
[0336] Step 7: Synthesis of N-((4, 6-dimethyl-2-oxo-l, 2-dihydropyridin-3-yl) methyl)-5- (ethyl (tetrahydro-2H-pyran-4-yl) amino)-4-methyl-4'-(morpholinomethyl)-[l, l'-biphenyl]-3- carboxamide [0337] To a stirred solution of 5-bromo-N-((4, 6-dimethyl-2-oxo-l, 2-dihydropyridin-3-yl) methyl)-3-(ethyl (tetrahydro-2H-pyran-4-yl) amino)-2-methylbenzamide (14 g, 29.5 mmol) in dioxane/ water mixture (70 mL/14 mL) was added 4-(4-(4, 4, 5, 5-tetramethyl-l, 3, 2- dioxaborolan-2-yl) benzyl) morpholine (13.4 g, 44.2 mmol) followed by addition of Na2C03 (11.2 g, 106.1 mmol). The solution was purged with argon for 15 minutes and then Pd (PPh )4 (3.40 g, 2.94 mmol) was added and the solution was again purged with argon for a further 10 min. The reaction mixture was heated at 100°C for 4 h. After completion (monitored by TLC), the reaction mixture was diluted with water and extracted with 10percent MeOH/DCM. The combined organic layers were dried over anhydrous sodium sulphate, filtered and concentrated under reduced pressure. The crude compound was purified by column chromatography (100- 200 mesh silica gel) eluting with methanol: DCM to the title compound as a solid (12 g, 71 percent). Analytical Data: LCMS: 573.35 (M + 1)+; HPLC: 99.5percent ( 254 nm) (R,;3.999; Method: Column: YMC ODS-A 150 mm x 4.6 mm x 5 μ; Mobile Phase: A; 0.05percent TFA in water/ B; 0.05percent TFA in acetonitrile; Inj. Vol: 10 μ, Col. Temp.: 30 °C; Flow rate: 1.4 mL/min.; Gradient: 5percent B to 95percent B in 8 min, Hold for 1.5 min, 9.51-12 min 5percent B); 1H NMR (DMSO-J6, 400 MHz) δ 11.46 (s, 1H), 8.19 (t, 1H), 7.57 (d, 2H, J=7.2 Hz), 7.36-7.39 (m, 3H), 7.21 (s, 1H), 5.85 (s, 1H), 4.28 (d, 2H, J=2.8 Hz), 3.82 (d, 2H, J=9.6 Hz), 3.57 (bs, 4H), 3.48 (s, 2H), 3.24 (t, 2H, J=10.8Hz), 3.07-3.09 (m, 2H), 3.01 (m, 1H), 2.36 (m, 4H), 2.24 (s, 3H), 2.20 (s, 3H), 2.10 (s, 3H), 1.64-1.67 (m, 2H), 1.51-1.53 (m, 2H), 0.83 (t, 3H, J=6.4 Hz).
71% With tetrakis(triphenylphosphine) palladium(0); sodium carbonate In 1,4-dioxane; water at 100℃; for 4 h; Inert atmosphere N - [(4,6- dimethyl-2-carboxy-1,2-dihydro-3-pyridyl) methyl] -2-methyl-3- [ethyl (tetrahydro -2H- 4- pyran-yl) amino] -5-carboxamide bromobenzene (14g, 29.5mmol) was dissolved in dioxane / water mixture (70mL /14mL), added with stirring 4- (4-morpholino-methyl) phenylboronic acid pinacol ester (13.4g, 44.2mmol), followed by the addition of sodium carbonate (11.2g, 105.7mmol). Solution was purged with argon for 15min, then add tetrakis (triphenylphosphine) palladium (3.40g, 2.94mmol), a solution of purified argon and then 10min. The reaction mixture was heated to 100 reaction 4h. Tracking progress of the reaction TLC, eluent: methanol / dichloromethane (1:10), add water, 50mL, methanol / dichloromethane: extraction (19). The organic layer was dried over anhydrous sodium sulfate, and concentrated under reduced pressure. The crude product was chromatographed on silica gel column, eluent: methanol / dichloromethane (1:10) to give a solid product 12g, Yield 71percent
Reference: [1] Patent: US2012/264734, 2012, A1, . Location in patent: Page/Page column 128
[2] Patent: WO2013/155464, 2013, A1, . Location in patent: Paragraph 0336; 0337
[3] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
[4] Patent: CN105440023, 2016, A, . Location in patent: Paragraph 0090; 0091; 0092
  • 2
  • [ 1173081-96-3 ]
  • [ 1403254-99-8 ]
YieldReaction ConditionsOperation in experiment
90%
Stage #1: With triethylamine In dimethyl sulfoxide at 15 - 25℃; for 0.5 h;
Stage #2: With benzotriazol-1-ol; 1-ethyl-(3-(3-dimethylamino)propyl)-carbodiimide hydrochloride In dimethyl sulfoxide at 20℃; for 16 h;
Stage #3: With triethylamine In water; dimethyl sulfoxide at 19 - 30℃; for 4 h;
N-((4,6-dimethyl-2-oxo-l,2-dihydropyridin-3-yl)methyl)-5-(ethyl(tetrahydro-2H- pyran-4-yl)amino)-4-methyl-4 '-(morpholinomethyl)- [1,1 '-biphenyl] -3-carboxamide (Compound I)
A mixture of 5-(ethyl(tetrahydro-2H-pyran-4-yl)amino)-4-methyl-4'- (morpho linomethyl)-[ 1,1 '-biphenyl] -3 -carboxylic acid (540 g, 1.23 mol) and 3-(aminomethyl)- 4,6-dimethyl-dihydro-pyridin-2(lH)-one hydrochloride (279 g, 1.48 mol) was suspended in DMSO (2.70 L) and treated with triethylamine (223 ml, 1.60 mol). The mixture was stirred at 25 °C for 30 min and treated with EDC-HC1 (354 g, 1.85 mol) and HOBT hydrate (283 g, 1.85 mol). The reaction mixture was stirred at rt for 16 h. After addition of triethylamine (292 ml, 2.09 mol), the mixture was cooled to 15 °C, diluted with water (10.1 L) maintaining the temperature below 30 °C, and stirred at 19-25 °C for 4 h. The resulting precipitate was filtered, washed twice with water (2.70 L), and dried under vacuum to give a crude product (695 g, wt-wt analysis = 78percent). For the further purification of the product, recrystallization was conducted. A crude product (20.00 g, 34.92 mmol) was suspended in a mixture of ethanol (190 ml) and water (10.00 ml) and heated to 75°C until a clear solution was obtained. The solution was allowed to cool to rt overnight. The precipitate was filtered, washed twice with a mixture of ethanol (30.0 ml) and water (30.0 ml), and dried under vacuum at 35 °C to give the title compound as an off white solid (14.0 g, 70percent recovery from the crude and 90percent> yield based on wt-wt assay).
Reference: [1] Patent: WO2015/57859, 2015, A1, . Location in patent: Paragraph 093; 094
  • 3
  • [ 1000342-11-9 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
[5] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
[6] Patent: CN105440023, 2016, A,
  • 4
  • [ 1403257-49-7 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
[5] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
[6] Patent: CN105440023, 2016, A,
  • 5
  • [ 1403257-79-3 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
[5] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
[6] Patent: CN105440023, 2016, A,
  • 6
  • [ 107650-20-4 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
  • 7
  • [ 220514-28-3 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
  • 8
  • [ 1975-50-4 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
[2] Patent: WO2013/155317, 2013, A1,
[3] Patent: WO2013/155464, 2013, A1,
[4] Patent: WO2015/57859, 2015, A1,
  • 9
  • [ 79669-49-1 ]
  • [ 1403254-99-8 ]
Reference: [1] Patent: US2012/264734, 2012, A1,
  • 10
  • [ 1403257-81-7 ]
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Reference: [1] Patent: US2012/264734, 2012, A1,
  • 11
  • [ 29943-42-8 ]
  • [ 1403254-99-8 ]
Reference: [1] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
[2] Patent: CN105440023, 2016, A,
  • 12
  • [ 769-28-8 ]
  • [ 1403254-99-8 ]
Reference: [1] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
  • 13
  • [ 771579-27-2 ]
  • [ 1403257-81-7 ]
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Reference: [1] Journal of Medicinal Chemistry, 2016, vol. 59, # 4, p. 1556 - 1564
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